| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
PDF |
| 1 |  | c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.034e+00 | 0.3411 | 21.0 | 1.56% | 5.4 | 0.39% | motif file (matrix) |
pdf |
| 2 |  | ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.480e+00 | 0.3411 | 59.0 | 4.38% | 32.8 | 2.34% | motif file (matrix) |
pdf |
| 3 |  | E-box/Arabidopsis-Promoters/Homer | 1e-2 | -5.902e+00 | 0.3525 | 17.0 | 1.26% | 4.8 | 0.34% | motif file (matrix) |
pdf |
| 4 |  | Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.785e+00 | 0.3525 | 177.0 | 13.13% | 136.5 | 9.77% | motif file (matrix) |
pdf |
| 5 |  | NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.720e+00 | 0.3525 | 59.0 | 4.38% | 34.3 | 2.45% | motif file (matrix) |
pdf |
| 6 |  | Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer | 1e-2 | -5.319e+00 | 0.3525 | 10.0 | 0.74% | 1.9 | 0.14% | motif file (matrix) |
pdf |
| 7 |  | PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer | 1e-2 | -4.972e+00 | 0.3832 | 60.0 | 4.45% | 38.0 | 2.72% | motif file (matrix) |
pdf |
| 8 |  | n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.629e+00 | 0.4726 | 28.0 | 2.08% | 13.0 | 0.93% | motif file (matrix) |
pdf |