Homer de novo Motif Results (/Volumes/Macintosh_HD/Users/zhengao/bio/Struc_features/in_data/chip-seq/1_narowPeaks/more/data/9_homer_out/162/TI//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 3000
Total background sequences = 2502
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-663	-1.528e+03	87.37%	16.54%	21.1bp (27.9bp)	DAL80/Literature(Harbison)/Yeast(0.953) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-43	-1.010e+02	20.67%	7.63%	19.2bp (28.5bp)	SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer(0.961) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-34	-7.925e+01	26.73%	13.40%	20.1bp (23.9bp)	Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)(0.853) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-24	-5.755e+01	11.03%	3.74%	20.2bp (20.0bp)	RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.966) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-21	-4.938e+01	7.73%	2.17%	20.5bp (25.1bp)	BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer(0.976) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-18	-4.162e+01	3.27%	0.31%	20.8bp (10.2bp)	Gsc/dmmpmm(Noyes)/fly(0.775) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-16	-3.798e+01	2.93%	0.28%	20.1bp (9.5bp)	ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer(0.687) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-14	-3.235e+01	2.70%	0.29%	18.5bp (9.2bp)	ASH1/Literature(Harbison)/Yeast(0.718) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-14	-3.235e+01	1.77%	0.04%	22.0bp (7.9bp)	achi/MA0207.1/Jaspar(0.704) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-13	-3.189e+01	2.33%	0.20%	20.1bp (21.6bp)	ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.829) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-13	-3.179e+01	2.07%	0.09%	19.5bp (11.9bp)	CRZ1(MacIsaac)/Yeast(0.687) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-13	-3.075e+01	2.90%	0.40%	16.8bp (11.0bp)	MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer(0.748) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-12	-2.913e+01	2.60%	0.33%	20.6bp (10.8bp)	Crx/MA0467.1/Jaspar(0.697) More Information \| Similar Motifs Found	motif file (matrix)
14 *		1e-11	-2.687e+01	2.03%	0.19%	18.4bp (20.7bp)	SD0002.1_at_AC_acceptor/Jaspar(0.822) More Information \| Similar Motifs Found	motif file (matrix)
15 *		1e-10	-2.376e+01	1.30%	0.04%	14.8bp (9.1bp)	LEC2/MA0581.1/Jaspar(0.666) More Information \| Similar Motifs Found	motif file (matrix)
16 *		1e-7	-1.765e+01	0.97%	0.00%	19.1bp (0.0bp)	Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer(0.763) More Information \| Similar Motifs Found	motif file (matrix)
17 *		1e-4	-1.085e+01	0.93%	0.14%	16.5bp (13.6bp)	SP3/MA0746.1/Jaspar(0.876) More Information \| Similar Motifs Found	motif file (matrix)
18 *		1e-4	-1.022e+01	1.07%	0.23%	17.3bp (8.8bp)	ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer(0.727) More Information \| Similar Motifs Found	motif file (matrix)
19 *		1e-3	-8.994e+00	1.13%	0.30%	18.8bp (4.7bp)	TBF1/MA0403.1/Jaspar(0.797) More Information \| Similar Motifs Found	motif file (matrix)