Homer de novo Motif Results (/Volumes/Macintosh_HD/Users/zhengao/bio/Struc_features/in_data/chip-seq/1_narowPeaks/more/data/9_homer_out/49/CI//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 3000
Total background sequences = 2723
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-279	-6.429e+02	48.20%	7.42%	16.3bp (22.3bp)	Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer(0.987) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-87	-2.018e+02	17.90%	2.64%	17.5bp (22.0bp)	Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer(0.980) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-56	-1.291e+02	19.57%	5.86%	19.4bp (23.6bp)	RUNX1/MA0002.2/Jaspar(0.971) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-48	-1.114e+02	18.27%	5.80%	19.6bp (19.3bp)	ETV6/MA0645.1/Jaspar(0.904) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-36	-8.506e+01	12.10%	3.27%	19.9bp (22.8bp)	IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer(0.831) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-22	-5.183e+01	6.00%	1.27%	20.8bp (26.9bp)	MAFG::NFE2L1/MA0089.1/Jaspar(0.841) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-13	-3.176e+01	2.87%	0.41%	16.1bp (13.1bp)	Al/dmmpmm(Noyes_hd)/fly(0.693) More Information \| Similar Motifs Found	motif file (matrix)
8 *		1e-11	-2.695e+01	1.80%	0.12%	17.8bp (16.1bp)	Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.876) More Information \| Similar Motifs Found	motif file (matrix)
9 *		1e-11	-2.673e+01	1.53%	0.05%	21.0bp (0.0bp)	STE12/MA0393.1/Jaspar(0.781) More Information \| Similar Motifs Found	motif file (matrix)
10 *		1e-10	-2.407e+01	4.30%	1.45%	20.9bp (13.9bp)	ERF094/MA1049.1/Jaspar(0.763) More Information \| Similar Motifs Found	motif file (matrix)
11 *		1e-9	-2.269e+01	1.17%	0.03%	20.7bp (1.3bp)	ATHB-7/MA0954.1/Jaspar(0.686) More Information \| Similar Motifs Found	motif file (matrix)
12 *		1e-9	-2.124e+01	2.50%	0.59%	20.1bp (15.2bp)	GT-1/MA1020.1/Jaspar(0.848) More Information \| Similar Motifs Found	motif file (matrix)
13 *		1e-8	-2.042e+01	3.57%	1.20%	18.6bp (18.7bp)	SeqBias: GCW-triplet(0.829) More Information \| Similar Motifs Found	motif file (matrix)
14 *		1e-8	-2.017e+01	3.97%	1.47%	19.3bp (38.0bp)	SeqBias: polyC-repeat(0.841) More Information \| Similar Motifs Found	motif file (matrix)
15 *		1e-8	-1.983e+01	1.40%	0.12%	17.7bp (9.9bp)	SWI6(MacIsaac)/Yeast(0.841) More Information \| Similar Motifs Found	motif file (matrix)
16 *		1e-7	-1.761e+01	1.17%	0.10%	19.7bp (6.2bp)	SWI5/Literature(Harbison)/Yeast(0.710) More Information \| Similar Motifs Found	motif file (matrix)
17 *		1e-7	-1.701e+01	1.13%	0.10%	22.7bp (0.0bp)	MEF2A/MA0052.3/Jaspar(0.733) More Information \| Similar Motifs Found	motif file (matrix)
18 *		1e-3	-7.016e+00	0.47%	0.07%	18.5bp (9.5bp)	Trl/dmmpmm(Down)/fly(0.912) More Information \| Similar Motifs Found	motif file (matrix)